STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4NKZ1_EUTSATranslation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (663 aa)    
Predicted Functional Partners:
V4LZU7_EUTSA
Uncharacterized protein.
   
 
 0.867
V4L5W0_EUTSA
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.862
V4KJ07_EUTSA
Ribosomal_TL5_C domain-containing protein.
  
   0.846
V4LED4_EUTSA
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.804
V4KGX4_EUTSA
Ribosomal_L18_c domain-containing protein.
   
 
 0.758
V4KR87_EUTSA
Ribosomal_L18_c domain-containing protein.
   
 
 0.758
V4LQ64_EUTSA
S4 RNA-binding domain-containing protein.
   
 
 0.747
V4M0D0_EUTSA
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.746
V4M931_EUTSA
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.746
rps7
30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit.
   
 
 0.706
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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