STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4P1S8_EUTSAUncharacterized protein. (550 aa)    
Predicted Functional Partners:
V4MKL1_EUTSA
Uncharacterized protein.
      
 0.606
V4MDG9_EUTSA
RGS domain-containing protein.
      
 0.605
V4MKN3_EUTSA
Uncharacterized protein.
      
 0.588
V4MBB5_EUTSA
Uncharacterized protein.
      
 0.561
V4KC70_EUTSA
Protein-lysine N-methyltransferase EUTSA_v10018777mg; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
      
 0.545
V4P6Q1_EUTSA
RING-type E3 ubiquitin transferase.
    
 
 0.540
V4P6L6_EUTSA
Uncharacterized protein.
      
 0.520
V4LJN7_EUTSA
Uncharacterized protein; Belongs to the heat shock protein 70 family.
    
 
 0.442
V4P1S0_EUTSA
Uncharacterized protein; Belongs to the heat shock protein 70 family.
    
 
 0.442
V4LRR6_EUTSA
Uncharacterized protein.
      
 0.422
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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