STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4LC98_EUTSAUncharacterized protein. (378 aa)    
Predicted Functional Partners:
V4JUE7_EUTSA
G-patch domain-containing protein.
   
 
 0.500
V4JWL7_EUTSA
Nop domain-containing protein.
   
 
 0.471
V4KRG2_EUTSA
Nop domain-containing protein.
   
 
 0.471
V4NQ87_EUTSA
Nop domain-containing protein.
   
 
 0.471
V4LLC5_EUTSA
Uncharacterized protein.
   
 
 0.449
V4LTR0_EUTSA
Uncharacterized protein.
   
 
 0.449
V4NBH9_EUTSA
Uncharacterized protein.
   
 
 0.449
V4P5H1_EUTSA
Uncharacterized protein.
   
 
 0.449
V4LX04_EUTSA
RRM domain-containing protein.
   
   0.440
V4KBQ0_EUTSA
Nop domain-containing protein.
   
 
 0.415
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.