STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL92090.1DNA repair protein RadC; Belongs to the UPF0758 family. (227 aa)    
Predicted Functional Partners:
outO
Pectic enzymes secretion protein OutO.
     
 0.886
fgs
Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
  
  
 0.807
valS
Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
     
 0.777
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
  
 0.691
AKL92089.1
Hypothetical protein.
       0.629
AKL91268.1
DNA utilization protein GntX.
  
    0.573
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
 
   
 0.552
dprA
DNA protecting protein DprA.
  
  
 0.533
recN
Recombination protein N; May be involved in recombinational repair of damaged DNA.
  
   
 0.523
mutS_1
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
 
   
 0.513
Your Current Organism:
Staphylococcus capitis
NCBI taxonomy Id: 72758
Other names: S. capitis subsp. capitis, Staphylococcus capitis subsp. capitis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.