STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKA99086.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)    
Predicted Functional Partners:
KKA98482.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.727
KKA99711.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.686
KKA99088.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.680
KKA99130.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.658
KKA99419.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
KKA98510.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
yihI
Aminotransferase; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.
  
     0.636
KKA98722.1
Potassium transporter Trk; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.633
KKA98978.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0319 family.
  
     0.630
KKA98827.1
Lsg locus protein 4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
Your Current Organism:
Avibacterium paragallinarum
NCBI taxonomy Id: 728
Other names: A. paragallinarum, ATCC 29545, CCUG 12835, CIP 103453, DSM 18554, Haemophilus gallinarum, Haemophilus paragallinarum, NCTC 11296
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.