STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFC25802.1Diguanylate cyclase/phosphodiesterase. (620 aa)    
Predicted Functional Partners:
SFC21005.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.978
SFD33112.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.978
SFD44281.1
Methylase of chemotaxis methyl-accepting proteins.
 
 0.967
SFC98653.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
0.966
SFD40597.1
PAS domain S-box-containing protein.
 
 0.957
SFD23912.1
Putative addiction module antidote protein, CC2985 family.
 
 0.955
SFC58613.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
 
 0.954
SFD23889.1
PAS domain S-box-containing protein.
 
 0.954
SFD45455.1
PAS domain S-box-containing protein.
  
 0.954
SFD14543.1
PAS domain S-box-containing protein.
 
 0.953
Your Current Organism:
Devosia psychrophila
NCBI taxonomy Id: 728005
Other names: CGMCC 1.10210, CIP 110130, D. psychrophila, DSM 22950, Devosia psychrophila Zhang et al. 2012, Devosia sp. Cr7-05, strain Cr7-05
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