STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD04298.1Polar amino acid transport system substrate-binding protein. (266 aa)    
Predicted Functional Partners:
SFD04318.1
Polar amino acid transport system permease protein.
  0.919
SFD44281.1
Methylase of chemotaxis methyl-accepting proteins.
    
 0.906
SFD14403.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)/amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 
 0.872
SFD22326.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.852
SFD23912.1
Putative addiction module antidote protein, CC2985 family.
   
 0.848
SFD18787.1
Cystine transport system permease protein.
 
  0.831
SFD43554.1
Polar amino acid transport system permease protein.
 
  0.827
SFD26552.1
Polar amino acid transport system permease protein.
 
  0.814
SFD43529.1
Polar amino acid transport system permease protein.
 
  0.804
SFD45455.1
PAS domain S-box-containing protein.
   
 0.790
Your Current Organism:
Devosia psychrophila
NCBI taxonomy Id: 728005
Other names: CGMCC 1.10210, CIP 110130, D. psychrophila, DSM 22950, Devosia psychrophila Zhang et al. 2012, Devosia sp. Cr7-05, strain Cr7-05
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.