STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygjI_1Unannotated protein. (480 aa)    
Predicted Functional Partners:
ygjH
Unannotated protein.
 
     0.559
algE4
Unannotated protein.
  
     0.517
tvaI
Unannotated protein; Belongs to the glycosyl hydrolase 13 family.
  
 
  0.483
nplT
Unannotated protein.
  
 
  0.464
trpC
Unannotated protein; Belongs to the TrpC family.
    
 
 0.452
ygjK
Unannotated protein.
  
     0.450
yeaR
Unannotated protein.
  
     0.436
acrH
Unannotated protein.
  
     0.433
GCA_000819825_01835
Unannotated protein.
  
  
 0.420
GCA_000819825_04081
Unannotated protein.
  
     0.414
Your Current Organism:
Aeromonas encheleia
NCBI taxonomy Id: 73010
Other names: A. encheleia, ATCC 51929, Aeromonas eucrenophila subgroup II, Aeromonas sp. DSM 11577, Aeromonas sp. HG11, CECT 4342, CIP 104608, DSM 11577, LMG 16330, LMG:16330, NCTC 12917, strain S181, ten Aeromonas encheleia-like isolates
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.