Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
clpB | yfiH | GCA_000819825_03365 | GCA_000819825_03366 | Unannotated protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.499 |
rluD | yfiH | GCA_000819825_03367 | GCA_000819825_03366 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.626 |
rluD | yfiO | GCA_000819825_03367 | GCA_000819825_03368 | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.619 |
yfiH | clpB | GCA_000819825_03366 | GCA_000819825_03365 | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Unannotated protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. | 0.499 |
yfiH | rluD | GCA_000819825_03366 | GCA_000819825_03367 | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.626 |
yfiH | yfiO | GCA_000819825_03366 | GCA_000819825_03368 | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.442 |
yfiH | yggS | GCA_000819825_03366 | GCA_000819825_00911 | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Unannotated protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.858 |
yfiO | rluD | GCA_000819825_03368 | GCA_000819825_03367 | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.619 |
yfiO | yfiH | GCA_000819825_03368 | GCA_000819825_03366 | Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.442 |
yggS | yfiH | GCA_000819825_00911 | GCA_000819825_03366 | Unannotated protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Unannotated protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.858 |