STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D0Z67_03960Unannotated protein. (290 aa)    
Predicted Functional Partners:
D0Z67_03965
Unannotated protein.
 
     0.962
D0Z67_03955
Unannotated protein.
 
     0.959
D0Z67_03970
Unannotated protein.
       0.753
D0Z67_07125
Unannotated protein.
  
     0.704
D0Z67_03990
Unannotated protein.
       0.675
pxpB
Unannotated protein.
       0.675
pxpA
Unannotated protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.675
D0Z67_15560
Unannotated protein.
  
     0.653
D0Z67_11670
Unannotated protein.
  
     0.646
D0Z67_06150
Unannotated protein.
  
     0.641
Your Current Organism:
Streptomyces seoulensis
NCBI taxonomy Id: 73044
Other names: CIP 105312, IFO 16255, IFO 16668, IMSNU 21266, JCM 10116, NBRC 16255, NBRC 16668, S. seoulensis, Streptomyces sp. USC028, Streptomyces sp. USC046, strain IMSNU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.