STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D0Z67_18810Unannotated protein. (1200 aa)    
Predicted Functional Partners:
D0Z67_18815
Unannotated protein.
 
 
 0.996
D0Z67_18820
Unannotated protein.
 
 
 0.982
D0Z67_14850
Unannotated protein.
  
 
 0.779
D0Z67_01425
Unannotated protein.
  
 
 0.779
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
    
  0.755
thyX
Unannotated protein; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.
  
  
  0.462
D0Z67_06530
Unannotated protein.
  
    0.457
D0Z67_23755
Unannotated protein.
   
    0.450
hpt
Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.427
purA
Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.400
Your Current Organism:
Streptomyces seoulensis
NCBI taxonomy Id: 73044
Other names: CIP 105312, IFO 16255, IFO 16668, IMSNU 21266, JCM 10116, NBRC 16255, NBRC 16668, S. seoulensis, Streptomyces sp. USC028, Streptomyces sp. USC046, strain IMSNU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.