Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
D0Z67_01990 | D0Z67_06805 | GCA_000725795_02100 | GCA_000725795_04746 | Unannotated protein. | Unannotated protein. | 0.836 |
D0Z67_01990 | nusG | GCA_000725795_02100 | GCA_000725795_02621 | Unannotated protein. | Unannotated protein; Participates in transcription elongation, termination and antitermination. | 0.925 |
D0Z67_01990 | pnp | GCA_000725795_02100 | GCA_000725795_05392 | Unannotated protein. | Unannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.820 |
D0Z67_01990 | rho-2 | GCA_000725795_02100 | GCA_000725795_02982 | Unannotated protein. | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.776 |
D0Z67_01990 | rpoA | GCA_000725795_02100 | GCA_000725795_02580 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
D0Z67_01990 | rpoB | GCA_000725795_02100 | GCA_000725795_02615 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
D0Z67_01990 | rpoC | GCA_000725795_02100 | GCA_000725795_02614 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.982 |
D0Z67_01990 | rpoZ | GCA_000725795_02100 | GCA_000725795_01383 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.966 |
D0Z67_06805 | D0Z67_01990 | GCA_000725795_04746 | GCA_000725795_02100 | Unannotated protein. | Unannotated protein. | 0.836 |
D0Z67_06805 | D0Z67_16685 | GCA_000725795_04746 | GCA_000725795_05062 | Unannotated protein. | Unannotated protein. | 0.836 |
D0Z67_06805 | nusA | GCA_000725795_04746 | GCA_000725795_05417 | Unannotated protein. | Unannotated protein; Participates in both transcription termination and antitermination. | 0.836 |
D0Z67_06805 | nusG | GCA_000725795_04746 | GCA_000725795_02621 | Unannotated protein. | Unannotated protein; Participates in transcription elongation, termination and antitermination. | 0.929 |
D0Z67_06805 | pnp | GCA_000725795_04746 | GCA_000725795_05392 | Unannotated protein. | Unannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.815 |
D0Z67_06805 | rho-2 | GCA_000725795_04746 | GCA_000725795_02982 | Unannotated protein. | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.761 |
D0Z67_06805 | rpoA | GCA_000725795_04746 | GCA_000725795_02580 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.993 |
D0Z67_06805 | rpoB | GCA_000725795_04746 | GCA_000725795_02615 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
D0Z67_06805 | rpoC | GCA_000725795_04746 | GCA_000725795_02614 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
D0Z67_06805 | rpoZ | GCA_000725795_04746 | GCA_000725795_01383 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.921 |
D0Z67_16685 | D0Z67_06805 | GCA_000725795_05062 | GCA_000725795_04746 | Unannotated protein. | Unannotated protein. | 0.836 |
D0Z67_16685 | nusG | GCA_000725795_05062 | GCA_000725795_02621 | Unannotated protein. | Unannotated protein; Participates in transcription elongation, termination and antitermination. | 0.925 |
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