STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D0Z67_23080Unannotated protein. (157 aa)    
Predicted Functional Partners:
D0Z67_23075
Unannotated protein.
       0.756
zapE
Unannotated protein.
 
     0.741
murC
Unannotated protein; Cell wall formation; Belongs to the MurCDEF family.
       0.721
msrB
Unannotated protein; Belongs to the MsrB Met sulfoxide reductase family.
       0.714
D0Z67_23065
Unannotated protein.
       0.651
D0Z67_15625
Unannotated protein.
  
     0.621
D0Z67_11230
Unannotated protein.
  
     0.575
D0Z67_09485
Unannotated protein.
  
     0.568
D0Z67_17885
Unannotated protein.
  
     0.565
D0Z67_06405
Unannotated protein.
       0.561
Your Current Organism:
Streptomyces seoulensis
NCBI taxonomy Id: 73044
Other names: CIP 105312, IFO 16255, IFO 16668, IMSNU 21266, JCM 10116, NBRC 16255, NBRC 16668, S. seoulensis, Streptomyces sp. USC028, Streptomyces sp. USC046, strain IMSNU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.