STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D0Z67_20555Unannotated protein. (215 aa)    
Predicted Functional Partners:
GCA_000725795_03529
Unannotated protein.
       0.786
D0Z67_20560
Unannotated protein.
       0.754
D0Z67_20565
Unannotated protein.
    
  0.745
D0Z67_07940
Unannotated protein.
  
     0.591
D0Z67_11970
Unannotated protein.
  
     0.470
D0Z67_05495
Unannotated protein.
  
     0.433
D0Z67_01500
Unannotated protein.
  
    0.433
D0Z67_17895
Unannotated protein.
  
     0.407
D0Z67_26130
Unannotated protein; Belongs to the long-chain O-acyltransferase family.
  
     0.400
Your Current Organism:
Streptomyces seoulensis
NCBI taxonomy Id: 73044
Other names: CIP 105312, IFO 16255, IFO 16668, IMSNU 21266, JCM 10116, NBRC 16255, NBRC 16668, S. seoulensis, Streptomyces sp. USC028, Streptomyces sp. USC046, strain IMSNU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.