STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D0Z67_21245Unannotated protein. (135 aa)    
Predicted Functional Partners:
D0Z67_21255
Unannotated protein.
     
 0.915
D0Z67_21250
Unannotated protein.
       0.785
D0Z67_21235
Unannotated protein.
       0.744
D0Z67_21265
Unannotated protein.
     
 0.743
D0Z67_00735
Unannotated protein.
 
     0.714
D0Z67_21270
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
     
 0.709
D0Z67_21260
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.694
D0Z67_21230
Unannotated protein.
       0.677
GCA_000725795_05644
Unannotated protein.
       0.485
D0Z67_18460
Unannotated protein.
  
     0.480
Your Current Organism:
Streptomyces seoulensis
NCBI taxonomy Id: 73044
Other names: CIP 105312, IFO 16255, IFO 16668, IMSNU 21266, JCM 10116, NBRC 16255, NBRC 16668, S. seoulensis, Streptomyces sp. USC028, Streptomyces sp. USC046, strain IMSNU-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.