STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748285_00366Unannotated protein. (490 aa)    
Predicted Functional Partners:
GCA_001748285_00365
Unannotated protein.
 
     0.603
GCA_001748285_00183
Unannotated protein.
  
    0.593
GCA_001748285_01836
Unannotated protein.
  
     0.585
GCA_001748285_04377
Unannotated protein.
  
     0.495
GCA_001748285_02970
Unannotated protein.
  
     0.486
GCA_001748285_04245
Unannotated protein.
  
     0.481
GCA_001748285_03138
Unannotated protein.
  
     0.479
GCA_001748285_00518
Unannotated protein.
 
  
 0.459
GCA_001748285_04054
Unannotated protein.
  
     0.458
GCA_001748285_02964
Unannotated protein.
  
     0.447
Your Current Organism:
Thermogemmatispora onikobensis
NCBI taxonomy Id: 732234
Other names: JCM 16817, KCTC 19768, Ktedonobacteria bacterium ONI-1, T. onikobensis, Thermogemmatispora onikobensis Yabe et al. 2011, strain ONI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.