STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748285_01512Unannotated protein. (156 aa)    
Predicted Functional Partners:
GCA_001748285_03121
Unannotated protein.
  
 
 0.794
GCA_001748285_03812
Unannotated protein.
    
  0.785
GCA_001748285_04278
Unannotated protein.
    
  0.779
GCA_001748285_03646
Unannotated protein.
    
 0.772
GCA_001748285_03481
Unannotated protein.
    
  0.764
GCA_001748285_04129
Unannotated protein.
    
 0.761
GCA_001748285_01489
Unannotated protein.
   
 
  0.748
GCA_001748285_03718
Unannotated protein.
    
  0.741
GCA_001748285_01079
Unannotated protein.
  
     0.679
GCA_001748285_00833
Unannotated protein.
  
     0.673
Your Current Organism:
Thermogemmatispora onikobensis
NCBI taxonomy Id: 732234
Other names: JCM 16817, KCTC 19768, Ktedonobacteria bacterium ONI-1, T. onikobensis, Thermogemmatispora onikobensis Yabe et al. 2011, strain ONI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.