STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748285_02230Unannotated protein. (423 aa)    
Predicted Functional Partners:
GCA_001748285_02827
Unannotated protein.
 
 
 
 0.969
GCA_001748285_02231
Unannotated protein.
 
     0.948
GCA_001748285_02378
Unannotated protein.
 
 
 
 0.940
GCA_001748285_02561
Unannotated protein.
   
 
 0.862
GCA_001748285_02673
Unannotated protein.
 
     0.782
GCA_001748285_01596
Unannotated protein.
  
     0.710
GCA_001748285_03546
Unannotated protein.
 
     0.692
GCA_001748285_04245
Unannotated protein.
  
     0.658
GCA_001748285_03201
Unannotated protein.
  
     0.652
GCA_001748285_03202
Unannotated protein.
  
     0.648
Your Current Organism:
Thermogemmatispora onikobensis
NCBI taxonomy Id: 732234
Other names: JCM 16817, KCTC 19768, Ktedonobacteria bacterium ONI-1, T. onikobensis, Thermogemmatispora onikobensis Yabe et al. 2011, strain ONI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.