STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001748285_03298Unannotated protein. (632 aa)    
Predicted Functional Partners:
GCA_001748285_00041
Unannotated protein.
 
 0.869
GCA_001748285_04361
Unannotated protein.
   
 0.860
GCA_001748285_00204
Unannotated protein.
 
  
 0.835
GCA_001748285_02366
Unannotated protein.
 
  
0.827
GCA_001748285_02327
Unannotated protein.
 
 
  0.816
GCA_001748285_02363
Unannotated protein.
 
   
 0.808
GCA_001748285_00466
Unannotated protein.
    
 0.781
GCA_001748285_01636
Unannotated protein.
 
     0.661
GCA_001748285_01493
Unannotated protein.
  
 
 0.659
GCA_001748285_00525
Unannotated protein.
  
   
 0.657
Your Current Organism:
Thermogemmatispora onikobensis
NCBI taxonomy Id: 732234
Other names: JCM 16817, KCTC 19768, Ktedonobacteria bacterium ONI-1, T. onikobensis, Thermogemmatispora onikobensis Yabe et al. 2011, strain ONI-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.