GX50_09027 protein (Emmonsia crescens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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[Homology]

Score

GX50_09027

Uncharacterized protein. (155 aa)

Predicted Functional Partners:

GX50_07246

0.778

GX50_04564

0.694

GX50_02806

0.694

GX50_06087

0.583

GX50_07263

0.579

GX50_06766

0.579

GX50_05786

0.579

GX50_02494

0.579

GX50_05087

0.578

GX50_04107

0.578

Your Current Organism:

Emmonsia crescens

NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GX50_02494	GX50_04107	A0A2B7ZL58	A0A2B7ZIX4	Ribosomal protein S15.	Ribosomal protein S6.	0.999
GX50_02494	GX50_05087	A0A2B7ZL58	A0A2B7ZDS3	Ribosomal protein S15.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
GX50_02494	GX50_05786	A0A2B7ZL58	A0A2B7ZEK6	Ribosomal protein S15.	Ribosomal protein S2.	0.999
GX50_02494	GX50_06087	A0A2B7ZL58	A0A2B7ZCS2	Ribosomal protein S15.	40S ribosomal protein S20.	0.995
GX50_02494	GX50_06766	A0A2B7ZL58	A0A2B7ZA80	Ribosomal protein S15.	Uncharacterized protein.	0.999
GX50_02494	GX50_09027	A0A2B7ZL58	A0A2B7XSH9	Ribosomal protein S15.	Uncharacterized protein.	0.579
GX50_02806	GX50_04564	A0A2B7ZMC5	A0A2B7ZH38	Nitrate reductase (NADH).	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.984
GX50_02806	GX50_09027	A0A2B7ZMC5	A0A2B7XSH9	Nitrate reductase (NADH).	Uncharacterized protein.	0.694
GX50_04107	GX50_02494	A0A2B7ZIX4	A0A2B7ZL58	Ribosomal protein S6.	Ribosomal protein S15.	0.999
GX50_04107	GX50_05087	A0A2B7ZIX4	A0A2B7ZDS3	Ribosomal protein S6.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
GX50_04107	GX50_05786	A0A2B7ZIX4	A0A2B7ZEK6	Ribosomal protein S6.	Ribosomal protein S2.	0.999
GX50_04107	GX50_06087	A0A2B7ZIX4	A0A2B7ZCS2	Ribosomal protein S6.	40S ribosomal protein S20.	0.999
GX50_04107	GX50_06766	A0A2B7ZIX4	A0A2B7ZA80	Ribosomal protein S6.	Uncharacterized protein.	0.999
GX50_04107	GX50_09027	A0A2B7ZIX4	A0A2B7XSH9	Ribosomal protein S6.	Uncharacterized protein.	0.578
GX50_04564	GX50_02806	A0A2B7ZH38	A0A2B7ZMC5	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Nitrate reductase (NADH).	0.984
GX50_04564	GX50_09027	A0A2B7ZH38	A0A2B7XSH9	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.694
GX50_05087	GX50_02494	A0A2B7ZDS3	A0A2B7ZL58	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S15.	0.999
GX50_05087	GX50_04107	A0A2B7ZDS3	A0A2B7ZIX4	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S6.	0.999
GX50_05087	GX50_05786	A0A2B7ZDS3	A0A2B7ZEK6	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S2.	0.999
GX50_05087	GX50_06087	A0A2B7ZDS3	A0A2B7ZCS2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S20.	0.999

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Network Stats

number of nodes:

11

number of edges:

55

average node degree:

10

avg. local clustering coefficient:

1

expected number of edges:

21

PPI enrichment p-value:

2.54e-10

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009847

Spore germination

7 of 32

2.01

4.05

3.58e-10

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:5204

Spore germination GerAC-like, and Spore germination GerAB

5 of 6

2.59

4.23

7.97e-09

CL:5071

Spore germination, and Sporulation

6 of 78

1.56

2.12

1.54e-06

CL:5068

Cell differentiation, and Protein of unknown function DUF1256

7 of 134

1.39

1.85

1.13e-06

CL:4657

Mixed, incl. YugN-like family, and Positive regulation of sporulation

2 of 5

2.27

1.1

0.0089

CL:4631

Mostly uncharacterized, incl. Cytochrome complex assembly, and Cellular ketone metabolic process

3 of 41

1.53

0.96

0.0089

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF03845

Spore germination protein

3 of 9

2.19

1.54

0.0012

PF03323

Bacillus/Clostridium GerA spore germination protein

3 of 10

2.15

1.53

0.0012

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR004995

Bacillus/Clostridium Ger spore germination protein

3 of 9

2.19

1.32

0.0032

IPR004761

Spore germination GerAB

3 of 9

2.19

1.32

0.0032

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