STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_08946Tyrosine--tRNA ligase. (398 aa)    
Predicted Functional Partners:
GX50_03987
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1.
 
 0.990
GX50_02285
Tyrosine--tRNA ligase.
    
 0.958
GX50_08677
Phosphoribosylaminoimidazolesuccinocarboxamide synthase.
      0.901
GX50_06682
Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.898
GX50_04715
Tryptophan synthase.
  
  
 0.861
GX50_08715
Methionine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.842
GX50_04368
Glycine-tRNA ligase.
  
  
 0.833
GX50_08047
Leucine-tRNA ligase.
  
 
 0.772
GX50_04303
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.757
GX50_05007
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.749
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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