STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_06349Pre-mRNA cleavage complex 2 protein Pcf11. (652 aa)    
Predicted Functional Partners:
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
    
 0.999
GX50_06241
Uncharacterized protein.
   
 0.998
GX50_06932
Cleavage stimulation factor subunit 3.
    
 0.996
GX50_01072
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.993
GX50_01917
Symplekin.
    
 0.990
GX50_06046
Endoribonuclease ysh1.
    
 0.989
GX50_00570
Cleavage stimulation factor subunit 2.
    
 0.989
GX50_03547
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.989
GX50_07487
RNA polymerase II subunit A domain phosphatase ssu72.
   
 
 0.972
GX50_01101
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.972
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.