STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_07645Uncharacterized protein. (350 aa)    
Predicted Functional Partners:
GX50_00984
Nuclear cap-binding protein subunit 2.
    
 0.686
GX50_08298
Nuclear cap-binding protein subunit 1.
    
 0.682
GX50_04674
U1 small nuclear ribonucleoprotein C.
    
 0.670
GX50_05553
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
   
 0.665
GX50_00051
DNA-directed RNA polymerase I, II, and III subunit RPABC1.
   
  0.664
GX50_06067
DNA-directed RNA polymerase I, II, and III subunit RPABC5.
    
  0.661
GX50_03171
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.659
GX50_00989
DNA-directed RNA polymerase II subunit RPB9.
    
  0.655
GX50_00678
DNA-directed RNA polymerase II subunit RPB4.
    
 0.655
GX50_03328
Nuclear pore complex protein Nup62.
    
 0.650
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.