Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CLP1 | GX50_00570 | A0A2B7Z9U7 | A0A2B7ZJ67 | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | Cleavage stimulation factor subunit 2. | 0.989 |
| CLP1 | GX50_00921 | A0A2B7Z9U7 | A0A2B7ZQG0 | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | tRNA-splicing endonuclease subunit Sen54. | 0.835 |
| CLP1 | GX50_00940 | A0A2B7Z9U7 | A0A2B7ZRH1 | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | Uncharacterized protein. | 0.892 |
| CLP1 | GX50_07337 | A0A2B7Z9U7 | A0A2B7Z8I2 | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.796 |
| GX50_00537 | GX50_00921 | A0A2B7ZSN2 | A0A2B7ZQG0 | tRNA-intron endonuclease. | tRNA-splicing endonuclease subunit Sen54. | 0.469 |
| GX50_00537 | GX50_04001 | A0A2B7ZSN2 | A0A2B7ZIZ4 | tRNA-intron endonuclease. | Sen15 domain-containing protein. | 0.472 |
| GX50_00537 | GX50_07337 | A0A2B7ZSN2 | A0A2B7Z8I2 | tRNA-intron endonuclease. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.662 |
| GX50_00570 | CLP1 | A0A2B7ZJ67 | A0A2B7Z9U7 | Cleavage stimulation factor subunit 2. | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | 0.989 |
| GX50_00570 | GX50_07337 | A0A2B7ZJ67 | A0A2B7Z8I2 | Cleavage stimulation factor subunit 2. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.587 |
| GX50_00921 | CLP1 | A0A2B7ZQG0 | A0A2B7Z9U7 | tRNA-splicing endonuclease subunit Sen54. | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | 0.835 |
| GX50_00921 | GX50_00537 | A0A2B7ZQG0 | A0A2B7ZSN2 | tRNA-splicing endonuclease subunit Sen54. | tRNA-intron endonuclease. | 0.469 |
| GX50_00921 | GX50_04001 | A0A2B7ZQG0 | A0A2B7ZIZ4 | tRNA-splicing endonuclease subunit Sen54. | Sen15 domain-containing protein. | 0.585 |
| GX50_00921 | GX50_07337 | A0A2B7ZQG0 | A0A2B7Z8I2 | tRNA-splicing endonuclease subunit Sen54. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.896 |
| GX50_00940 | CLP1 | A0A2B7ZRH1 | A0A2B7Z9U7 | Uncharacterized protein. | mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. | 0.892 |
| GX50_00940 | GX50_07337 | A0A2B7ZRH1 | A0A2B7Z8I2 | Uncharacterized protein. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.557 |
| GX50_02582 | GX50_07337 | A0A2B7ZN40 | A0A2B7Z8I2 | 3-hydroxyisobutyrate dehydrogenase. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.598 |
| GX50_02928 | GX50_07337 | A0A2B7ZLL8 | A0A2B7Z8I2 | Sulfite reductase (NADPH) hemoprotein beta-component. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.627 |
| GX50_03981 | GX50_06164 | A0A2B7ZJ54 | A0A2B7ZAR1 | RNase_PH domain-containing protein. | Ribonuclease Z. | 0.658 |
| GX50_03981 | GX50_07337 | A0A2B7ZJ54 | A0A2B7Z8I2 | RNase_PH domain-containing protein. | tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...] | 0.743 |
| GX50_04001 | GX50_00537 | A0A2B7ZIZ4 | A0A2B7ZSN2 | Sen15 domain-containing protein. | tRNA-intron endonuclease. | 0.472 |
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