STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_06570Multifunctional methyltransferase subunit TRM112. (155 aa)    
Predicted Functional Partners:
GX50_08251
Uncharacterized protein.
    
 0.997
GX50_06580
Uncharacterized protein.
   
 0.996
GX50_05030
tRNA (Guanine10-N2)-methyltransferase.
   
 0.982
GX50_06460
Methyltranfer_dom domain-containing protein.
    
 0.967
GX50_06341
tRNA (Uracil-5-)-methyltransferase TRM9.
   
 0.964
GX50_03534
tRNA wybutosine-synthesizing protein 2.
   
 
 0.962
GX50_02032
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.848
GX50_05160
U3 small nucleolar RNA-associated protein 14.
   
 
 0.836
GX50_00416
Pre-rRNA-processing protein TSR1.
   
   0.834
GX50_07810
Ribosomal RNA-processing protein 12.
   
   0.830
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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