STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_06227Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (336 aa)    
Predicted Functional Partners:
GX50_04486
Protein transporter SEC24.
   
 0.993
GX50_01076
Protein transporter SEC24.
   
 0.991
GX50_08898
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
   
 0.988
GX50_00429
Protein transporter SEC31.
   
 0.988
GX50_08948
Protein transporter SEC23; Belongs to the universal ribosomal protein uL11 family.
 
  
  0.960
GX50_05502
Vesicle transporter SEC22; Belongs to the synaptobrevin family.
   
 0.955
GX50_03040
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.954
GX50_07873
Small COPII coat GTPase sar1; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.928
GX50_07874
Uncharacterized protein.
    
 0.928
GX50_06028
Uncharacterized protein.
   
 0.877
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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