STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_02385Protein CMS1. (280 aa)    
Predicted Functional Partners:
GX50_01508
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.854
GX50_07333
Protein LTV1.
   
    0.831
GX50_02386
RRM domain-containing protein.
 
 
   0.787
GX50_05732
U3 small nucleolar RNA-associated protein 23.
   
    0.750
GX50_04599
Nucleolar protein 15.
   
    0.747
GX50_05070
Essential nuclear protein 1.
   
  
 0.745
GX50_02402
Ribosomal RNA-processing protein 1.
   
    0.735
GX50_01954
Ribosome production factor 2.
   
   0.703
GX50_01520
NUC153 domain-containing protein.
   
    0.685
GX50_06319
Nucleolar protein 4.
   
    0.665
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.