STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_05351DUF2428 domain-containing protein. (1691 aa)    
Predicted Functional Partners:
GX50_01589
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
 
 0.925
GX50_06523
WD_REPEATS_REGION domain-containing protein.
   
 
 0.593
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 
 0.592
GX50_06725
Uncharacterized protein.
   
 
 0.572
GX50_06724
21S rRNA (-2'-O)-methyltransferase.
   
 
 0.572
GX50_02575
Replication factor A2.
    
   0.519
GX50_08740
Urb2 domain-containing protein.
  
    0.492
GX50_05349
Uncharacterized protein.
 
      0.457
GX50_03006
Elongation factor 3.
   
    0.453
GX50_07507
U3 small nucleolar RNA-associated protein 21.
   
   0.427
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.