STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_04925Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
GX50_04636
TATA-box-binding protein.
    
 0.726
GX50_01567
BTB domain-containing protein.
    
 0.726
GX50_08042
HIT domain-containing protein.
    
 0.692
GX50_05029
HIT domain-containing protein.
    
 0.692
GX50_02996
Uncharacterized protein.
    
 0.692
GX50_05727
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.681
GX50_07904
Bis(5'-adenosyl)-triphosphatase.
    
  0.646
GX50_01910
Uncharacterized protein.
    
  0.646
GX50_00076
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.637
GX50_08835
DNA-directed RNA polymerase I subunit RPA49.
     
 0.620
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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