STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_04605Uncharacterized protein. (450 aa)    
Predicted Functional Partners:
GX50_02032
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.932
GX50_09009
Centromere/microtubule-binding protein CBF5.
   
   0.897
GX50_08602
Centromere/microtubule-binding protein cbf5.
   
   0.897
GX50_08012
60S ribosomal protein L3.
    
   0.837
GX50_02338
Deoxyribose-phosphate aldolase.
   
 
 0.813
GX50_02727
Uncharacterized protein.
   
 
 0.801
GX50_06359
ATP-dependent RNA helicase DBP9.
   
   0.789
GX50_04614
Ribosome biogenesis protein SSF1/2.
   
   0.761
GX50_05782
Uncharacterized protein.
   
   0.738
GX50_01088
Nucleolar protein 56.
   
   0.713
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.