STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_03253DNA polymerase sigma subunit. (685 aa)    
Predicted Functional Partners:
GX50_06279
Uncharacterized protein.
   
 
 0.921
GX50_00830
ATP-dependent RNA helicase DOB1.
   
 
 0.896
GX50_00281
Cell differentiation protein rcd1.
    
   0.879
GX50_03349
Protein NRD1.
    
 
 0.869
GX50_02721
Uncharacterized protein.
     
 
0.779
GX50_07561
Uncharacterized protein.
   
 
 0.704
GX50_03912
Antiviral helicase SKI2.
   
 
 0.635
GX50_04112
Polyadenylate-binding protein 2.
    
 
 0.628
GX50_06332
Cellular nucleic acid-binding protein.
   
 
 0.611
GX50_03142
Cellular nucleic acid-binding protein.
   
 
 0.611
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.