Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | GX50_01105 | A0A2B7ZE89 | A0A2B7ZSB7 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CLP1_P domain-containing protein. | 0.804 |
ERB1 | GX50_02339 | A0A2B7ZE89 | A0A2B7ZNA3 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pre-rRNA-processing protein IPI3. | 0.979 |
ERB1 | GX50_02945 | A0A2B7ZE89 | A0A2B7ZM64 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | ULP_PROTEASE domain-containing protein. | 0.716 |
ERB1 | GX50_03386 | A0A2B7ZE89 | A0A2B7ZLY3 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.617 |
ERB1 | GX50_05280 | A0A2B7ZE89 | A0A2B7ZG10 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pre-rRNA-processing protein IPI1. | 0.794 |
ERB1 | GX50_06983 | A0A2B7ZE89 | A0A2B7Z9M6 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nuclear GTP-binding protein. | 0.999 |
ERB1 | NOP7 | A0A2B7ZE89 | A0A2B7ZIS6 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
GX50_01105 | ERB1 | A0A2B7ZSB7 | A0A2B7ZE89 | CLP1_P domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.804 |
GX50_01105 | GX50_02339 | A0A2B7ZSB7 | A0A2B7ZNA3 | CLP1_P domain-containing protein. | Pre-rRNA-processing protein IPI3. | 0.979 |
GX50_01105 | GX50_02945 | A0A2B7ZSB7 | A0A2B7ZM64 | CLP1_P domain-containing protein. | ULP_PROTEASE domain-containing protein. | 0.916 |
GX50_01105 | GX50_03386 | A0A2B7ZSB7 | A0A2B7ZLY3 | CLP1_P domain-containing protein. | Uncharacterized protein. | 0.589 |
GX50_01105 | GX50_05280 | A0A2B7ZSB7 | A0A2B7ZG10 | CLP1_P domain-containing protein. | Pre-rRNA-processing protein IPI1. | 0.931 |
GX50_01105 | GX50_06983 | A0A2B7ZSB7 | A0A2B7Z9M6 | CLP1_P domain-containing protein. | Nuclear GTP-binding protein. | 0.687 |
GX50_01105 | NOP7 | A0A2B7ZSB7 | A0A2B7ZIS6 | CLP1_P domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.678 |
GX50_02296 | GX50_03386 | A0A2B7ZLJ1 | A0A2B7ZLY3 | Uncharacterized protein. | Uncharacterized protein. | 0.570 |
GX50_02296 | GX50_07246 | A0A2B7ZLJ1 | A0A2B7Z9V3 | Uncharacterized protein. | Uncharacterized protein. | 0.628 |
GX50_02339 | ERB1 | A0A2B7ZNA3 | A0A2B7ZE89 | Pre-rRNA-processing protein IPI3. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.979 |
GX50_02339 | GX50_01105 | A0A2B7ZNA3 | A0A2B7ZSB7 | Pre-rRNA-processing protein IPI3. | CLP1_P domain-containing protein. | 0.979 |
GX50_02339 | GX50_02945 | A0A2B7ZNA3 | A0A2B7ZM64 | Pre-rRNA-processing protein IPI3. | ULP_PROTEASE domain-containing protein. | 0.869 |
GX50_02339 | GX50_03386 | A0A2B7ZNA3 | A0A2B7ZLY3 | Pre-rRNA-processing protein IPI3. | Uncharacterized protein. | 0.696 |
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