STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_01284Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1025 aa)    
Predicted Functional Partners:
GX50_04445
Pre-mRNA-processing factor 17.
   
 0.998
GX50_08266
Cir_N domain-containing protein.
    
 0.996
GX50_07260
Uncharacterized protein.
   
 0.996
GX50_02647
Pre-mRNA-splicing factor slu7.
   
 0.994
GX50_02144
Pre-mRNA-splicing factor cwc22.
   
 0.992
GX50_01509
Pre-mRNA-splicing factor cef1.
 
 
 0.990
GX50_01948
Pre-mRNA-splicing helicase BRR2.
    
 
 0.989
GX50_07769
Bud site selection protein 31.
    
 0.988
GX50_06864
Pre-mRNA-processing factor 19.
   
 0.988
GX50_07932
Pre-mRNA-splicing factor syf2.
    
 0.986
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.