STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_01653Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
GX50_01205
PHD finger-like domain-containing protein 5A.
   
   0.812
GX50_05939
Pre-mRNA-splicing factor rse1.
    
   0.809
GX50_07245
Splicing factor 3B subunit 2.
    
   0.809
GX50_06748
Splicing factor 3B subunit 1.
    
   0.809
GX50_03095
RING finger protein 113A.
    
   0.809
GX50_01324
Pre-mRNA-processing-splicing factor 8.
    
   0.809
GX50_07754
Uncharacterized protein.
    
   0.727
GX50_07392
Pre-mRNA-splicing factor cwc15.
   
   0.624
GX50_00607
Pre-mRNA branch site protein p14.
   
   0.623
GX50_02212
Small nuclear ribonucleoprotein Sm D2.
   
   0.614
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.