STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_00910Uncharacterized protein. (110 aa)    
Predicted Functional Partners:
GX50_06714
Histone H2A; Belongs to the histone H2A family.
    
 0.863
GX50_07110
Uncharacterized protein.
    
 0.839
GX50_01190
Uncharacterized protein.
    
 0.839
GX50_06713
Histone H2B; Belongs to the histone H2B family.
   
 0.838
GX50_01446
Histone acetyltransferase type B subunit 2.
   
 0.836
GX50_00932
Histone H2A; Belongs to the histone H2A family.
   
 0.806
GX50_06982
CBFD_NFYB_HMF domain-containing protein.
    
 0.766
GX50_03702
DNA-directed RNA polymerase I, II, and III subunit RPABC2.
    
 0.756
GX50_06787
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
    
 0.741
GX50_06583
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.735
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.