STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_01097Uncharacterized protein. (615 aa)    
Predicted Functional Partners:
GX50_03863
Uncharacterized protein.
    
 
 0.923
GX50_01324
Pre-mRNA-processing-splicing factor 8.
    
 
 0.871
GX50_01948
Pre-mRNA-splicing helicase BRR2.
    
 
 0.845
GX50_03557
U5 small nuclear ribonucleoprotein component.
   
 
 0.643
GX50_08737
HIT-type domain-containing protein.
    
 
 0.572
GX50_05336
Uncharacterized protein.
   
 
 0.569
GX50_06016
Prp8 binding protein.
    
   0.563
GX50_03402
ATP-dependent DNA helicase HFM1/MER3.
   
 
 0.562
GX50_00529
Uncharacterized protein.
      
 0.521
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.