STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GX50_01520NUC153 domain-containing protein. (750 aa)    
Predicted Functional Partners:
GX50_02570
RNA helicase.
   
 
 0.996
GX50_02415
U3 small nucleolar RNA-associated protein 3.
   
 
 0.994
GX50_01063
U3 small nucleolar RNA-associated protein 6.
   
 
 0.992
GX50_06704
U3 small nucleolar RNA-associated protein 22.
   
 
 0.991
GX50_00605
U3 small nucleolar RNA-associated protein 18.
   
 
 0.991
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
   0.988
GX50_01185
Uncharacterized protein.
   
 
 0.978
GX50_04615
ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family.
   
 
 0.976
GX50_00555
ATP-dependent RNA helicase DHR2.
   
 
 0.973
GX50_01866
MI domain-containing protein.
   
   0.971
Your Current Organism:
Emmonsia crescens
NCBI taxonomy Id: 73230
Other names: ATCC 13704, Ajellomyces crescens, CBS 177.60, Chrysosporium parvum var. crescens, E. crescens, Emmonsia parva var. crescens, UAMH 3008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.