Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GX50_01103 | GX50_01381 | A0A2B7ZRT2 | A0A2B7ZSQ8 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Beta_elim_lyase domain-containing protein. | 0.944 |
GX50_01103 | GX50_03904 | A0A2B7ZRT2 | A0A2B7ZIV6 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.921 |
GX50_01103 | GX50_04114 | A0A2B7ZRT2 | A0A2B7ZI86 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Alanine-glyoxylate transaminase/serine-glyoxylate transaminase/serine-pyruvate transaminase. | 0.958 |
GX50_01103 | GX50_04143 | A0A2B7ZRT2 | A0A2B7ZIQ7 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Threonine dehydratase. | 0.936 |
GX50_01103 | GX50_05207 | A0A2B7ZRT2 | A0A2B7ZFP9 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Threonine synthase. | 0.448 |
GX50_01103 | GX50_05215 | A0A2B7ZRT2 | A0A2B7ZF63 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.987 |
GX50_01103 | GX50_06491 | A0A2B7ZRT2 | A0A2B7ZBZ5 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Threonine dehydratase. | 0.930 |
GX50_01103 | GX50_06543 | A0A2B7ZRT2 | A0A2B7ZBV2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | Threonine aldolase. | 0.948 |
GX50_01103 | GX50_06681 | A0A2B7ZRT2 | A0A2B7ZBN2 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | PALP domain-containing protein. | 0.930 |
GX50_01103 | GX50_08836 | A0A2B7ZRT2 | A0A2B7Z5L7 | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 5-aminolevulinate synthase, mitochondrial. | 0.934 |
GX50_01381 | GX50_01103 | A0A2B7ZSQ8 | A0A2B7ZRT2 | Beta_elim_lyase domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.944 |
GX50_01381 | GX50_03904 | A0A2B7ZSQ8 | A0A2B7ZIV6 | Beta_elim_lyase domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.944 |
GX50_01381 | GX50_04114 | A0A2B7ZSQ8 | A0A2B7ZI86 | Beta_elim_lyase domain-containing protein. | Alanine-glyoxylate transaminase/serine-glyoxylate transaminase/serine-pyruvate transaminase. | 0.944 |
GX50_01381 | GX50_04143 | A0A2B7ZSQ8 | A0A2B7ZIQ7 | Beta_elim_lyase domain-containing protein. | Threonine dehydratase. | 0.932 |
GX50_01381 | GX50_05207 | A0A2B7ZSQ8 | A0A2B7ZFP9 | Beta_elim_lyase domain-containing protein. | Threonine synthase. | 0.951 |
GX50_01381 | GX50_05215 | A0A2B7ZSQ8 | A0A2B7ZF63 | Beta_elim_lyase domain-containing protein. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.946 |
GX50_01381 | GX50_06491 | A0A2B7ZSQ8 | A0A2B7ZBZ5 | Beta_elim_lyase domain-containing protein. | Threonine dehydratase. | 0.928 |
GX50_01381 | GX50_06543 | A0A2B7ZSQ8 | A0A2B7ZBV2 | Beta_elim_lyase domain-containing protein. | Threonine aldolase. | 0.925 |
GX50_01381 | GX50_06681 | A0A2B7ZSQ8 | A0A2B7ZBN2 | Beta_elim_lyase domain-containing protein. | PALP domain-containing protein. | 0.932 |
GX50_01381 | GX50_08836 | A0A2B7ZSQ8 | A0A2B7Z5L7 | Beta_elim_lyase domain-containing protein. | 5-aminolevulinate synthase, mitochondrial. | 0.928 |
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