STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PY03776RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. (507 aa)    
Predicted Functional Partners:
PY01366
ATP-dependent helicase ddx1.
   
 0.851
PY00687
Drosophila melanogaster CG6353 gene product.
  
 0.809
PY05891
Probable RNA 3'-terminal phosphate cyclase-like protein.
  
  
 0.751
PY00093
Eukaryotic translation initiation factor 2 alpha subunit.
   
  
 0.488
PY05332
Uncharacterized protein.
    
 0.458
PY05205
Uncharacterized protein.
    
 0.458
PY02771
Blood-stage membrane protein Ag-1.
    
 0.458
PY00954
Major facilitator superfamily protein, putative.
    
 0.458
PY00899
Putative sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 0.458
PY00338
Uncharacterized protein.
    
 0.458
Your Current Organism:
Plasmodium yoelii
NCBI taxonomy Id: 73239
Other names: P. yoelii yoelii, Plasmodium yoelii subsp. yoelii, Plasmodium yoelii yoelii
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