STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygaUPeptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)    
Predicted Functional Partners:
B0186_11025
Phage tail protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.894
OOS00644.1
Baseplate assembly protein W; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.888
comE
Pilus modification protein PilQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.846
OOR99095.1
gpD; D protein; bacteriophage P2-like virions include a head and a tail; D protein contributes to tail formation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.841
pilB
Protein transporter HofB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.790
nadR
Nicotinamide-nucleotide adenylyltransferase; Catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside; also has a regulatory function; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.786
OOS02205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.763
OOS01304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.763
OOS01093.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.763
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.744
Your Current Organism:
Haemophilus haemoglobinophilus
NCBI taxonomy Id: 733
Other names: ATCC 19416, Bacillus haemoglobinophilus canis, Bacterium haemoglobinophilus, CCUG 3714, CIP 53.88, DSM 21241, H. haemoglobinophilus, Hemophilus canis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.