STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdM3Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)    
Predicted Functional Partners:
hsdS_4
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.977
hsdS_3
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.872
OOR98214.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.856
hsdR_3
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
   0.854
hsdR1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.829
hsdS1_4
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.812
hsdS2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.808
OOR99691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
hsdR_6
DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.
   
   0.680
OOR99639.1
Type III restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.599
Your Current Organism:
Haemophilus haemoglobinophilus
NCBI taxonomy Id: 733
Other names: ATCC 19416, Bacillus haemoglobinophilus canis, Bacterium haemoglobinophilus, CCUG 3714, CIP 53.88, DSM 21241, H. haemoglobinophilus, Hemophilus canis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.