Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OOR99100.1 | dipZ_1 | B0186_08115 | B0186_03655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| OOR99100.1 | dipZ_2 | B0186_08115 | B0186_03915 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protein-disulfide reductase DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | 0.571 |
| OOR99100.1 | dshB | B0186_08115 | B0186_08175 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.611 |
| OOR99100.1 | tatA | B0186_08115 | B0186_08130 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.519 |
| OOR99100.1 | tatB | B0186_08115 | B0186_08135 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.519 |
| OOR99100.1 | tatC | B0186_08115 | B0186_08140 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.519 |
| OOR99100.1 | ubiB | B0186_08115 | B0186_08125 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ubiquinone biosynthesis regulatory protein kinase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.773 |
| OOR99100.1 | ubiE | B0186_08115 | B0186_08110 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.762 |
| OOR99100.1 | yhhQ | B0186_08115 | B0186_08105 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phage major tail tube protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.499 |
| OOR99100.1 | yigP | B0186_08115 | B0186_08120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SCP2 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| dipZ_1 | OOR99100.1 | B0186_03655 | B0186_08115 | Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| dipZ_2 | OOR99100.1 | B0186_03915 | B0186_08115 | Protein-disulfide reductase DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| dshB | OOR99100.1 | B0186_08175 | B0186_08115 | Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.611 |
| tatA | OOR99100.1 | B0186_08130 | B0186_08115 | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
| tatA | tatB | B0186_08130 | B0186_08135 | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.995 |
| tatA | tatC | B0186_08130 | B0186_08140 | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.993 |
| tatA | ubiB | B0186_08130 | B0186_08125 | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Ubiquinone biosynthesis regulatory protein kinase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. | 0.664 |
| tatA | ubiE | B0186_08130 | B0186_08110 | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). | 0.628 |
| tatA | yigP | B0186_08130 | B0186_08120 | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | SCP2 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.573 |
| tatB | OOR99100.1 | B0186_08135 | B0186_08115 | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
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