Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOS00818.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family. (376 aa)    
Predicted Functional Partners:
OOS00817.1
O-antigen translocase; Involved in the movement of lipid III across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.850
OOR99851.1
Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.838
OOR99850.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.822
OOR99855.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.793
OOS00819.1
WavQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.722
OOS00820.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.720
OOR98183.1
Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.696
OOR99847.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.580
OOS00564.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.576
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.555
Your Current Organism:
Haemophilus paracuniculus
NCBI taxonomy Id: 734
Other names: ATCC 29986, CCUG 43573, CIP 107045, DSM 21452, H. paracuniculus
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