Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OOS00890.1Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (672 aa)    
Predicted Functional Partners:
OOS00891.1
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.942
OOS00880.1
Conjugative transfer ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.821
OOS00868.1
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.807
OOS00865.1
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
OOS00871.1
Integrating conjugative element membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
OOS00876.1
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
OOS00877.1
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
OOS00878.1
Integrating conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
OOS00879.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
OOS00883.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
Your Current Organism:
Haemophilus paracuniculus
NCBI taxonomy Id: 734
Other names: ATCC 29986, CCUG 43573, CIP 107045, DSM 21452, H. paracuniculus
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