Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOR99863.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)    
Predicted Functional Partners:
OOR99864.1
Chain length determination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.763
OOR99861.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.762
OOR99862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
OOR99856.1
Glycosyltransferase family 1 protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.756
OOR99860.1
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the transfer of the cytidylyl group of CTP to D- ribitol 5-phosphate; Belongs to the IspD/TarI cytidylyltransferase family. TarI subfamily.
 
     0.746
OOR99859.1
Nucleotide sugar dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.744
OOR99853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.736
OOR99857.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.733
OOR99855.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.732
OOR99858.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.722
Your Current Organism:
Haemophilus paracuniculus
NCBI taxonomy Id: 734
Other names: ATCC 29986, CCUG 43573, CIP 107045, DSM 21452, H. paracuniculus
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