OOR99275.1 protein (Haemophilus paracuniculus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Haemophilus paracuniculus

NCBI taxonomy Id: 734
Other names: ATCC 29986, CCUG 43573, CIP 107045, DSM 21452, H. paracuniculus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OOR99273.1	OOR99274.1	B0187_05820	B0187_05825	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.	0.570
OOR99273.1	OOR99275.1	B0187_05820	B0187_05830	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
OOR99273.1	OOR99276.1	B0187_05820	B0187_05835	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metalloprotease PmbA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406
OOR99273.1	rplM	B0187_05820	B0187_05810	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.565
OOR99273.1	rpsI	B0187_05820	B0187_05815	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.	0.596
OOR99274.1	OOR99273.1	B0187_05825	B0187_05820	Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
OOR99274.1	OOR99275.1	B0187_05825	B0187_05830	Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
OOR99274.1	OOR99276.1	B0187_05825	B0187_05835	Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.	Metalloprotease PmbA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.533
OOR99274.1	rplM	B0187_05825	B0187_05810	Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.413
OOR99274.1	rpsI	B0187_05825	B0187_05815	Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.	0.433
OOR99275.1	OOR99273.1	B0187_05830	B0187_05820	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
OOR99275.1	OOR99274.1	B0187_05830	B0187_05825	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.	0.842
OOR99275.1	OOR99276.1	B0187_05830	B0187_05835	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metalloprotease PmbA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.533
OOR99275.1	rplM	B0187_05830	B0187_05810	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.413
OOR99275.1	rpsI	B0187_05830	B0187_05815	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.	0.433
OOR99276.1	OOR99273.1	B0187_05835	B0187_05820	Metalloprotease PmbA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.406
OOR99276.1	OOR99274.1	B0187_05835	B0187_05825	Metalloprotease PmbA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.	0.533
OOR99276.1	OOR99275.1	B0187_05835	B0187_05830	Metalloprotease PmbA; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.533
rplM	OOR99273.1	B0187_05810	B0187_05820	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.565
rplM	OOR99274.1	B0187_05810	B0187_05825	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.	0.413