STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM38274.1Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family. (341 aa)    
Predicted Functional Partners:
SHM38225.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.998
SHM38171.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  0.996
SHM38324.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.995
SHM38471.1
Multiple monosaccharide-binding protein.
 
  
  0.952
SHM35241.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.867
SHM35204.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
  0.865
SHL98168.1
Erythritol ABC transporter ATP-binding protein.
  0.856
rbsA
Rhamnose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.845
rbsD
Ribose transport protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.838
SHM74486.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.809
Your Current Organism:
Labrenzia suaedae
NCBI taxonomy Id: 735517
Other names: DSM 22153, KACC 13772, L. suaedae, Labrenzia sp. YC6927, Labrenzia suaedae Bibi et al. 2014, strain YC6927
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