Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL28783.1 | SHL41586.1 | SAMN05444272_0212 | SAMN05444272_0531 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.591 |
SHL28783.1 | SHL56351.1 | SAMN05444272_0212 | SAMN05444272_0902 | Signal transduction histidine kinase. | Na+/proline symporter. | 0.997 |
SHL28783.1 | SHL63097.1 | SAMN05444272_0212 | SAMN05444272_1087 | Signal transduction histidine kinase. | Multi-sensor signal transduction histidine kinase. | 0.583 |
SHL28783.1 | SHM14865.1 | SAMN05444272_0212 | SAMN05444272_1906 | Signal transduction histidine kinase. | Two-component system, cell cycle sensor histidine kinase and response regulator CckA. | 0.974 |
SHL28783.1 | SHM34260.1 | SAMN05444272_0212 | SAMN05444272_2391 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.997 |
SHL28783.1 | SHM41059.1 | SAMN05444272_0212 | SAMN05444272_2558 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, response regulator CheY. | 0.968 |
SHL28783.1 | SHM41093.1 | SAMN05444272_0212 | SAMN05444272_2559 | Signal transduction histidine kinase. | CheW protein. | 0.737 |
SHL28783.1 | SHM41126.1 | SAMN05444272_0212 | SAMN05444272_2560 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.998 |
SHL28783.1 | SHM46155.1 | SAMN05444272_0212 | SAMN05444272_2684 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.993 |
SHL28783.1 | SHM88566.1 | SAMN05444272_0212 | SAMN05444272_3353 | Signal transduction histidine kinase. | PAS/PAC sensor hybrid histidine kinase. | 0.993 |
SHL41586.1 | SHL28783.1 | SAMN05444272_0531 | SAMN05444272_0212 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.591 |
SHL41586.1 | SHL56351.1 | SAMN05444272_0531 | SAMN05444272_0902 | PAS domain S-box-containing protein. | Na+/proline symporter. | 0.997 |
SHL41586.1 | SHL63097.1 | SAMN05444272_0531 | SAMN05444272_1087 | PAS domain S-box-containing protein. | Multi-sensor signal transduction histidine kinase. | 0.590 |
SHL41586.1 | SHM14865.1 | SAMN05444272_0531 | SAMN05444272_1906 | PAS domain S-box-containing protein. | Two-component system, cell cycle sensor histidine kinase and response regulator CckA. | 0.973 |
SHL41586.1 | SHM34260.1 | SAMN05444272_0531 | SAMN05444272_2391 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.997 |
SHL41586.1 | SHM41059.1 | SAMN05444272_0531 | SAMN05444272_2558 | PAS domain S-box-containing protein. | Two-component system, chemotaxis family, response regulator CheY. | 0.960 |
SHL41586.1 | SHM41093.1 | SAMN05444272_0531 | SAMN05444272_2559 | PAS domain S-box-containing protein. | CheW protein. | 0.699 |
SHL41586.1 | SHM41126.1 | SAMN05444272_0531 | SAMN05444272_2560 | PAS domain S-box-containing protein. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.998 |
SHL41586.1 | SHM46155.1 | SAMN05444272_0531 | SAMN05444272_2684 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.994 |
SHL41586.1 | SHM88566.1 | SAMN05444272_0531 | SAMN05444272_3353 | PAS domain S-box-containing protein. | PAS/PAC sensor hybrid histidine kinase. | 0.994 |
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