STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOR95940.1L-fucose:H+ symporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)    
Predicted Functional Partners:
OOR95937.1
L-fuculokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.708
OOR95939.1
L-fuculose phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.702
OOR95936.1
L-fucose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.638
OOR95463.1
acyl-[ACP]--phospholipid O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.619
OOR95941.1
Lactaldehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.607
nanA
N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.
  
  
 0.575
OOR95938.1
Fucose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.541
nrfA
Ammonia-forming cytochrome c nitrite reductase subunit c552; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
  
  
  0.446
OOR94638.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.406
Your Current Organism:
Haemophilus paraphrohaemolyticus
NCBI taxonomy Id: 736
Other names: ATCC 29237, CCUG 3718, CIP 102512, DSM 21451, H. paraphrohaemolyticus, NCTC 10670
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