Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OOR95346.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (68 aa)    
Predicted Functional Partners:
OOR95331.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
OOR95330.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.741
OOR96279.1
PTS fructose transporter subunit EIIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.695
OOR95332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.499
OOR95347.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
OOR96184.1
Malic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.491
OOR95329.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.422
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
     
 0.420
OOR95328.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.417
Your Current Organism:
Haemophilus paraphrohaemolyticus
NCBI taxonomy Id: 736
Other names: ATCC 29237, CCUG 3718, CIP 102512, DSM 21451, H. paraphrohaemolyticus, NCTC 10670
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